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Accueil > Les équipes > Chimie Structurale Organique et Biologique (CSOB) > Publications

Publications

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2015

A. M. Debela, M. Ortiz, V. Beni, S. Thorimbert, D. Lesage, R. B. Cole, C. K. O'Sullivan, et B. Hasenknopf, « Biofunctionalization of Polyoxometalates with DNA Primers, Their Use in the Polymerase Chain Reaction (PCR) and Electrochemical Detection of PCR Products », Chemistry – A European Journal, vol. 21, nᵒ 49, p. 17721-17727.

2014

S. Boudah, M. - F. Olivier, S. Aros-Calt, L. Oliveira, F. Fenaille, J. - C. Tabet, et C. Junot, « Annotation of the human serum metabolome by coupling three liquid chromatography methods to high-resolution mass spectrometry », Journal of Chromatography B-Analytical Technologies in the Biomedical and Life Sciences, vol. 966, p. 34-47.
J. Cotton, F. Leroux, S. Broudin, M. Marie, B. Corman, J. - C. Tabet, C. Ducruix, et C. Junot, « High-Resolution Mass Spectrometry Associated with Data Mining Tools for the Detection of Pollutants and Chemical Characterization of Honey Samples », Journal of Agricultural and Food Chemistry, vol. 62, nᵒ 46, p. 11335-11345.
E. Darii, G. Saravanamuthu, I. G. Gut, et J. - C. Tabet, « Structural studies of the sBBI/trypsin non-covalent complex using covalent modification and mass spectrometry », Rapid Communications in Mass Spectrometry, vol. 28, nᵒ 5, p. 413-429.
H. Dossmann, A. Schwarzenberg, D. Lesage, M. Perot-Taillandier, C. Afonso, B. C. de Miranda, et G. A. Garcia, « Vacuum Ultraviolet Photoionization Study of Gas Phase Vitamins A and B1 Using Aerosol Thermodesorption and Synchrotron Radiation », Journal of Physical Chemistry A, vol. 118, nᵒ 47, p. 11185-11192.
Q. Dumont et R. B. Cole, « Jean-Antoine Nollet: The Father of Experimental Electrospray », Mass Spectrometry Reviews, vol. 33, nᵒ 6, p. 418-423.
G. A. Garcia, H. Dossmann, L. Nahon, S. Daly, et I. Powis, « Photoelectron circular dichroism and spectroscopy of trifluoromethyl- and methyl-oxirane: a comparative study », Physical Chemistry Chemical Physics, vol. 16, nᵒ 30, p. 16214-16224.
C. Hubert, A. Schwarzenberg, H. Dossmann, R. B. Cole, X. Machuron-Mandard, et J. - C. Tabet, « Clarification of the 30 Da releases from the [M-H](-) and M-. ions of trinitrotoluene by electrospray high resolution mass spectrometry », Journal of Mass Spectrometry, vol. 49, nᵒ 4, p. 327-330.
F. Ichou, A. Schwarzenberg, D. Lesage, S. Alves, C. Junot, X. Machuron-Mandard, et J. - C. Tabet, « Comparison of the activation time effects and the internal energy distributions for the CID, PQD and HCD excitation modes », Journal of Mass Spectrometry, vol. 49, nᵒ 6, p. 498-508.
C. Le Vot, C. Afonso, C. Beaugrand, et J. - C. Tabet, « Penning ionization-FT-ICR: Application to diesel fuel analysis », International Journal of Mass Spectrometry, vol. 367, p. 35-42.
D. Lesage, A. Milet, A. Memboeuf, J. Blu, A. E. Greene, J. - C. Tabet, et Y. Gimbert, « The Pauson-Khand Mechanism Revisited: Origin of CO in the Final Product », Angewandte Chemie-International Edition, vol. 53, nᵒ 7, p. 1939-1942.
X. Liu et R. B. Cole, « "Best Match" Model and Effect of Na+/H+ Exchange on Anion Attachment to Peptides and Stability of Formed Adducts in Negative Ion Electrospray Mass Spectrometry », Journal of the American Society for Mass Spectrometry, vol. 25, nᵒ 2, p. 204-213.
X. Liu, J. - C. Tabet, et R. B. Cole, « Evidence for ion-ion interactions between peptides and anions (HSO4- or ClO4-) derived from high-acidity acids », Journal of Mass Spectrometry, vol. 49, nᵒ 6, p. 490-497.
A. Martelet, G. L'Hostis, P. Tavares, S. Brasiles, F. Fenaille, C. Rozand, A. Theretz, G. Gervasi, J. - C. Tabet, E. Ezan, C. Junot, B. H. Muller, et F. Becher, « Bacterial Detection Using Unlabeled Phage Amplification and Mass Spectrometry through Structural and Nonstructural Phage Markers », Journal of Proteome Research, vol. 13, nᵒ 3, p. 1450-1465.
J. - C. Martin, M. Maillot, G. Mazerolles, A. Verdu, B. Lyan, C. Migné, C. Defoort, C. Canlet, C. Junot, C. Guillou, C. Manach, D. Jabob, D. J. - R. Bouveresse, E. Paris, E. Pujos-Guillot, F. Jourdan, F. Giacomoni, F. Courant, G. Favé, G. L. Gall, H. Chassaigne, J. - C. Tabet, J. - F. Martin, J. - P. Antignac, L. Shintu, M. Defernez, M. Philo, M. - C. Alexandre-Gouaubau, M. - J. Amiot-Carlin, M. Bossis, M. N. Triba, N. Stojilkovic, N. Banzet, R. Molinié, R. Bott, S. Goulitquer, S. Caldarelli, et D. N. Rutledge, « Can we trust untargeted metabolomics? Results of the metabo-ring initiative, a large-scale, multi-instrument inter-laboratory study », Metabolomics, p. 1-15.
F. Mauger, J. - C. Tabet, et I. G. Gut, « A revisit of high collision energy effects on collision-induced dissociation spectra using matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry (MALDI-LIFT-TOF/TOF): application to the sequencing of RNA/DNA chimeras », Rapid Communications in Mass Spectrometry, vol. 28, nᵒ 13, p. 1433-1443.
S. S. Quadri, R. E. Stratford, S. M. Boue, et R. B. Cole, « Identification of Glyceollin Metabolites Derived from Conjugation with Glutathione and Glucuronic Acid in Male ZDSD Rats by Online Liquid Chromatography-Electrospray Ionization Tandem Mass Spectrometry », Journal of Agricultural and Food Chemistry, vol. 62, nᵒ 12, p. 2692-2700.
E. Rathahao-Paris, A. Paris, J. Bursztyka, J. - P. Jaeg, J. - P. Cravedi, et L. Debrauwer, « Identification of xenobiotic metabolites from biological fluids using flow injection analysis high-resolution mass spectrometry and post-acquisition data filtering », Rapid Communications in Mass Spectrometry, vol. 28, nᵒ 24, p. 2713-2722.
A. Schwarzenberg, H. Dossmann, R. B. Cole, X. Machuron-Mandard, et J. - C. Tabet, « Differentiation of isomeric dinitrotoluenes and aminodinitrotoluenes using electrospray high resolution mass spectrometry », Journal of Mass Spectrometry, vol. 49, nᵒ 12, p. 1330-1337.

2013

C. Bennaceur, C. Afonso, S. Alves, A. Bossée, et J. - C. Tabet, « Instrumental Dependent Dissociations of n-Propyl/Isopropyl Phosphonate Isomers: Evaluation of Resonant and Non-Resonant Vibrational Activations », Journal of The American Society for Mass Spectrometry, vol. 24, nᵒ 8, p. 1260-1270.
S. Bourgoin-Voillard, C. Afonso, D. Lesage, E. - L. Zins, J. - C. Tabet, et P. B. Armentrout, « Critical Evaluation of Kinetic Method Measurements: Possible Origins of Nonlinear Effects », Journal of The American Society for Mass Spectrometry, vol. 24, nᵒ 3, p. 365-380.
M. N. Boutaghou, C. M. Kronfel, L. S. Hernandez, A. Biswas, W. M. Schluchter, et R. B. Cole, « Direct differentiation of A-ring single attachment versus A- and D-ring double attachment of phycoerythrobilin chromophores to phycobiliproteins using MALDI mass spectrometry », Journal of Mass Spectrometry, vol. 48, nᵒ 2, p. 187-192.
B. Brahim, S. Alves, R. B. Cole, et J. - C. Tabet, « Charge Enhancement of Single-Stranded DNA in Negative Electrospray Ionization Using the Supercharging Reagent Meta-nitrobenzyl Alcohol », Journal of the American Society for Mass Spectrometry, vol. 24, nᵒ 12, p. 1988-1996.
H. Dossmann, C. Afonso, J. - C. Tabet, et E. Uggerud, « Unimolecular dissociation characteristics of cationic complexes between nicotinic acid and Cu(II) and Ni(II) », International Journal of Mass Spectrometry, vol. 354-355, p. 165-174.
C. Hubert, H. Dossmann, X. Machuron-Mandard, et J. - C. Tabet, « ESI formation of a Meisenheimer complex from tetryl and its unusual dissociation: Unusual dissociation of a Meisenheimer complex », Journal of Mass Spectrometry, vol. 48, nᵒ 3, p. 306-311.
F. Ichou, D. Lesage, X. Machuron-Mandard, C. Junot, R. B. Cole, et J. - C. Tabet, « Collision cell pressure effect on CID spectra pattern using triple quadrupole instruments: a RRKM modeling », Journal of Mass Spectrometry, vol. 48, nᵒ 2, p. 179-186.
G. N. Khairallah, C. C. L. Thum, D. Lesage, J. - C. Tabet, et R. A. J. O’Hair, « Gas-Phase Formation and Fragmentation Reactions of the Organomagnesates [RMgX <sub>2</sub> ] <sup>−</sup> », Organometallics, vol. 32, nᵒ 8, p. 2319-2328.
C. M. Kronfel, A. P. Kuzin, F. Forouhar, A. Biswas, M. Su, S. Lew, J. Seetharaman, R. Xiao, J. K. Everett, L. - C. Ma, T. B. Acton, G. T. Montelione, J. F. Hunt, C. E. C. Paul, T. M. Dragomani, M. N. Boutaghou, R. B. Cole, C. Riml, R. M. Alvey, D. A. Bryant, et W. M. Schluchter, « Structural and Biochemical Characterization of the Bilin Lyase CpcS from Thermosynechococcus elongatus », Biochemistry, vol. 52, nᵒ 48, p. 8663-8676.
M. M. Lorion, B. Matt, S. Alves, A. Proust, G. Poli, J. Oble, et G. Izzet, « Versatile Post-functionalization of Polyoxometalate Platforms By Using An Unprecedented Range of Palladium-Catalyzed Coupling Reactions », Chemistry-a European Journal, vol. 19, nᵒ 38, p. 12607-12612.
B. Matt, X. Xiang, A. L. Kaledin, N. Han, J. Moussa, H. Amouri, S. Alves, C. L. Hill, T. Lian, D. G. Musaev, G. Izzet, et A. Proust, « Long lived charge separation in iridium(III)-photosensitized polyoxometalates: synthesis, photophysical and computational studies of organometallic–redox tunable oxide assemblies », Chemical Science, vol. 4, nᵒ 4, p. 1737-1745.
S. S. Quadri, R. E. Stratford, S. M. Boué, et R. B. Cole, « Screening and Identification of Glyceollins and Their Metabolites by Electrospray Ionization Tandem Mass Spectrometry with Precursor Ion Scanning », Analytical Chemistry, vol. 85, nᵒ 3, p. 1727-1733.
A. Schwarzenberg, F. Ichou, R. B. Cole, X. Machuron-Mandard, C. Junot, D. Lesage, et J. - C. Tabet, « Identification tree based on fragmentation rules for structure elucidation of organophosphorus esters by electrospray mass spectrometry », Journal of Mass Spectrometry, vol. 48, nᵒ 5, p. 576-586.
S. Vitcher, C. Charvy, L. Dudragne, et J. - C. Tabet, « Characterization of an Electron Ionization Source Trap Operating in the Presence of a Magnetic Field Through Computer Simulation », Journal of The American Society for Mass Spectrometry, vol. 24, nᵒ 7, p. 1130-1136.

2012

C. Afonso, D. Lesage, F. Fournier, V. Mancel, et J. - C. Tabet, « Origin of enantioselective reduction of quaternary copper D,L amino acid complexes under vibrational activation conditions », International Journal of Mass Spectrometry, vol. 312, p. 185-194.
C. Afonso, J. - C. Tabet, G. Giorgi, et F. Turecek, « Gas-phase doubly charged complexes of cyclic peptides with copper in+1,+2 and+3 formal oxidation states: formation, structures and electron capture dissociation », Journal of Mass Spectrometry, vol. 47, nᵒ 2, p. 208-220.
M. N. Boutaghou et R. B. Cole, « 9,10-Diphenylanthracene as a matrix for MALDI-MS electron transfer secondary reactions », Journal of Mass Spectrometry, vol. 47, nᵒ 8, p. 995-1003.
L. Carlier, C. Byrne, E. Miclet, S. Bourgoin-Voillard, M. Nicaise, J. - C. Tabet, M. Desmadril, G. Leclercq, O. Lequin, et Y. Jacquot, « Biophysical studies of the interaction between calmodulin and the R-287-T-311 region of human estrogen receptor alpha reveals an atypical binding process », Biochemical and Biophysical Research Communications, vol. 419, nᵒ 2, p. 356-361.
H. Dossmann (Soldi-Lose), C. Afonso, D. Lesage, J. - C. Tabet, et E. Uggerud, « Formation and Characterization of Gaseous Adducts of Carbon Dioxide to Magnesium, (CO2)MgX− (X=OH, Cl, Br) », Angewandte Chemie International Edition, vol. 51, nᵒ 28, p. 6938–6941.
D. Lesage, A. Memboeuf, Y. Gimbert, et J. - C. Tabet, « RRKM modeling of collision activated reaction/collision induced dissociation experiments: Energy profile determination for phenylethyne incorporation on palladium (II)-phosphinous acid complex », International Journal of Mass Spectrometry, vol. 319, p. 31-39.
V. H. Nguyen, C. Afonso, et J. - C. Tabet, « Comparison of collision-induced dissociation and electron-induced dissociation of singly charged mononucleotides », International Journal of Mass Spectrometry, vol. 316, p. 140-146.
M. Pérot-Taillandier, S. Zirah, S. Rebuffat, U. Linne, M. A. Marahiel, R. B. Cole, J. - C. Tabet, et C. Afonso, « Determination of Peptide Topology through Time-Resolved Double-Resonance under Electron Capture Dissociation Conditions », Analytical Chemistry, vol. 84, nᵒ 11, p. 4957-4964.
N. S. Rannulu et R. B. Cole, « Novel Fragmentation Pathways of Anionic Adducts of Steroids Formed by Electrospray Anion Attachment Involving Regioselective Attachment, Regiospecific Decompositions, Charge-Induced Pathways, and Ion-Dipole Complex Intermediates », Journal of the American Society for Mass Spectrometry, vol. 23, nᵒ 9, p. 1558-1568.
A. Roux, Y. Xu, J. - F. Heilier, M. - F. Olivier, E. Ezan, J. - C. Tabet, et C. Junot, « Annotation of the Human Adult Urinary Metabolome and Metabolite Identification Using Ultra High Performance Liquid Chromatography Coupled to a Linear Quadrupole Ion Trap-Orbitrap Mass Spectrometer », Analytical Chemistry, vol. 84, nᵒ 15, p. 6429-6437.
A. Seyer, F. Fenaille, C. Féraudet-Tarisse, H. Volland, M. R. Popoff, J. - C. Tabet, C. Junot, et F. Becher, « Rapid Quantification of Clostridial Epsilon Toxin in Complex Food and Biological Matrixes by Immunopurification and Ultraperformance Liquid Chromatography-Tandem Mass Spectrometry », Analytical Chemistry, vol. 84, nᵒ 11, p. 5103-5109.
L. Svilar, V. Stankov-Jovanovic, D. Lesage, H. Dossmann, et J. - C. Tabet, « High-resolution mass spectrometry and hydrogen/deuterium exchange study of mitorubrin azaphilones and nitrogenized analogues », Journal of Mass Spectrometry, vol. 47, nᵒ 8, p. 969-977.

2011

S. Bourgoin-Voillard, F. Fournier, C. Afonso, Y. Jacquot, G. Leclercq, et J. - C. Tabet, « Calmodulin association with the synthetic ER alpha 17p peptide investigated by mass spectrometry », International Journal of Mass Spectrometry, vol. 305, nᵒ 2-3, p. 87-94.
A. Chaabo, J. de Ceaurriz, C. Buisson, J. - C. Tabet, et F. Lasne, « Simultaneous quantification and qualification of synacthen in plasma », Analytical and Bioanalytical Chemistry, vol. 399, nᵒ 5, p. 1835-1843.
E. Darii, G. Saravanamuthu, C. Afonso, S. Alves, I. Gut, et J. - C. Tabet, « Possible conformational change within the desolvated and cationized sBBI/trypsin non-covalent complex during the collision-induced dissociation process », Rapid Communications in Mass Spectrometry, vol. 25, nᵒ 12, p. 1725-1734.
C. Hocquelet, C. K. Jankowski, A. L. Pelletier, J. - C. Tabet, C. Lamouroux, et P. Berthault, « Synthesis and inclusion properties study of some mono 6-amino beta-cyclodextrin dimers bridged by N,N-succinyldiamide linkers », Journal of Inclusion Phenomena and Macrocyclic Chemistry, vol. 69, nᵒ 1-2, p. 75-84.
M. Karanik, D. Lesage, Y. Gimbert, P. Nava, S. Humbel, L. Giordano, G. Buono, et J. - C. Tabet, « Do Platinum(II) and Palladium(II) Phosphinito Phosphinous Acids Generate the Same Type of Reactive Intermediate in Alkyne Coordination? A Gas-Phase Study with Phenylethyne and Propargyl Acetate », Organometallics, vol. 30, nᵒ 18, p. 4814-4821.
C. Le Vot, C. Afonso, C. Beaugrand, et J. - C. Tabet, « Implementation of a Penning ionization source on a FTICR instrument with ion funnel optics », International Journal of Mass Spectrometry, vol. 306, nᵒ 2-3, p. 150-158.
C. Mesmin, F. Fenaille, F. Becher, J. - C. Tabet, et E. Ezan, « Identification and Characterization of Apelin Peptides in Bovine Colostrum and Milk by Liquid Chromatography-Mass Spectrometry », Journal of Proteome Research, vol. 10, nᵒ 11, p. 5222-5231.
V. H. Nguyen, C. Afonso, et J. - C. Tabet, « Concomitant EDD and EID of DNA evidenced by MSn and double resonance experiments », International Journal of Mass Spectrometry, vol. 301, nᵒ 1-3, p. 224-233.
A. Simonneau, F. Jaroschik, D. Lesage, M. Karanik, R. Guillot, M. Malacria, J. - C. Tabet, J. - P. Goddard, L. Fensterbank, V. Gandon, et Y. Gimbert, « Tracking gold acetylides in gold(I)-catalyzed cycloisomerization reactions of enynes », Chemical Science, vol. 2, nᵒ 12, p. 2417-2422.
B. Xue, S. Alves, C. Desbans, M. Souchaud, A. Filali-Ansary, P. Soubayrol, et J. - C. Tabet, « Heparin-like glycosaminoglycan/amine salt-bridge interactions: A new potential tool for HLGAGs analysis using mass spectrometry », Journal of Mass Spectrometry, vol. 46, nᵒ 7, p. 689-695.
S. Zirah, C. Afonso, U. Linne, T. A. Knappe, M. A. Marahiel, S. Rebuffat, et J. - C. Tabet, « Topoisomer Differentiation of Molecular Knots by FTICR MS: Lessons from Class II Lasso Peptides », Journal of the American Society for Mass Spectrometry, vol. 22, nᵒ 3, p. 467-479.

2010

S. Bourgoin-Voillard, D. Gallo, I. Laios, A. Cleeren, L. El Bali, Y. Jacquot, D. Nonclercq, G. Laurent, J. - C. Tabet, et G. Leclercq, « Capacity of type I and II ligands to confer to estrogen receptor alpha an appropriate conformation for the recruitment of coactivators containing a LxxLL motif-Relationship with the regulation of receptor level and ERE-dependent transcription in MCF-7 cells », Biochemical Pharmacology, vol. 79, nᵒ 5, p. 746-757.
C. Junot, G. Madalinski, J. - C. Tabet, et E. Ezan, « Fourier transform mass spectrometry for metabolome analysis », Analyst, vol. 135, nᵒ 9, p. 2203-2219.
M. A. van Agthoven, P. Colomby, M. Surugue, C. Beaugrand, F. L. Wind, et J. - C. Tabet, « Ion kinetic energy measurements in two soft ion ejection methods from a quadrupole ion trap », International Journal of Mass Spectrometry, vol. 296, nᵒ 1-3, p. 59-64.
Y. Xu, J. - F. Heilier, G. Madalinski, E. Genin, E. Ezan, J. - C. Tabet, et C. Junot, « Evaluation of Accurate Mass and Relative Isotopic Abundance Measurements in the LTQ-Orbitrap Mass Spectrometer for Further Metabolomics Database Building », Analytical Chemistry, vol. 82, nᵒ 13, p. 5490-5501.

2009

S. Bourgoin-Voillard, E. - L. Zins, F. Fournier, Y. Jacquot, C. Afonso, C. Pepe, G. Leclercq, et J. - C. Tabet, « Stereochemical Effects During [M-H](-) Dissociations of Epimeric 11-OH-17 beta-Estradiols and Distant Electronic Effects of Substituents at C-(11) Position on Gas Phase Acidity », Journal of the American Society for Mass Spectrometry, vol. 20, nᵒ 12, p. 2318-2333.
G. Lavison-Bompard, D. Thiébaut, J. - F. Beziau, B. Carrazé, P. Valette, X. Duteurtre, et J. - C. Tabet, « Hyphenation of atmospheric pressure chemical ionisation mass spectrometry to supercritical fluid chromatography for polar car lubricant additives analysis », Journal of Chromatography A, vol. 1216, nᵒ 5, p. 837-844.
N. Meklat, J. - C. Tabet, et J. de Ceaurriz, « Urine ratio of tetrahydrocortisol to tetrahydrodeoxycortisol to screen for the systemic administration of cortisone and hydrocortisone », Forensic Science International, vol. 185, nᵒ 1-3, p. 13-17.
R. Thota, D. Lesage, Y. Gimbert, L. Giordano, S. Humbel, A. Milet, G. Buono, et J. - C. Tabet, « Gas-Phase Study of Phenylacetylene and Norbornadiene on a Palladium(II) Phosphinous Acid Complex: Importance of the Order of Introduction of the Organic Partners », Organometallics, vol. 28, nᵒ 9, p. 2735-2743.
Y. Xu, C. Afonso, Y. Gimbert, F. Fournier, X. Dong, R. Wen, et J. - C. Tabet, « Gas phase self-association of Eudistomin U controlled by gas phase acidity and origin of its interaction with nucleobases », International Journal of Mass Spectrometry, vol. 286, nᵒ 2-3, p. 43-52.
E. - L. Zins, C. Pepe, D. Rondeau, S. Rochut, N. Galland, et J. - C. Tabet, « Theoretical and experimental study of tropylium formation from substituted benzylpyridinium species », Journal of Mass Spectrometry, vol. 44, nᵒ 1, p. 12-17.